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Species belonging to selected taxon:
Agrostis stolonifera
,
Avena barbata
,
Avena sativa
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Pseudoroegneria spicata
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Brachypodium distachyon
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST045049
species:
Hordeum vulgare
source:
microPC, original name:
miR1126
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCACTATGGACTACATACGGA
miRNA*
CGTATGTTGTCCGTAGTAGA
mismatches:
2
bulges:
0
View larger
pre-miRNA
TCCACTATGGACTACATACGGA
TGTATATAGACATACTGTAGAGTGTACAATCACTCGTTTTGCTC
CGTATGTTGTCCGTAGTAGA
dot-bracket secondary structure
((.(((((((((.(((((((((
.((((((((.....)))))(((((......)))))....)))))
))))))).))))))))).))
SIMILARITIES
miRBase
tae-MIR1122
:
0.00000000000002
PMRD
tae-miR1122
:
0.00000000000002
microPC
miR1436
:
2e-17
UniProt
no hits
RFAM
MIR1122: 1e-21
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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