miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Agrostis stolonifera
,
Avena barbata
,
Avena sativa
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Pseudoroegneria spicata
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Brachypodium distachyon
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST045821
species:
Hordeum vulgare
source:
microPC, original name:
miR1128
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTCCGAAA
miRNA*
CCGGACGGAGGGAGTA
mismatches:
1
bulges:
0
View larger
pre-miRNA
TACTCCCTCCGTCCGAAA
ATAGTTGTCTTCGAAATGAATGTATCTAGACTTAATTNTAGTTATAGATACATCCATTNTATTTATTTCTAGGACAAGTATT
T
CCGGACGGAGGGAGTA
dot-bracket secondary structure
(((((((((((((((.((
(((.(((((((.((((((((((((((((((((.......)))).))))))))).........))))))).))))))).))))
)
.)))))))))))))))
SIMILARITIES
miRBase
tae-MIR1128
:
0.00000002
PMRD
ata-miR1122
:
4e-16
microPC
miR1128
:
2e-58
UniProt
no hits
RFAM
MIR1122: 6e-31
MORE
miRNEST target predictions
non-miRNEST targets: none
download this record