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Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST005791
species: Triticum aestivum
miRNA family: MIR1135
source: miRNEST

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTGCGACAAGTAATTCGGAAC

miRNA*
 TCCAAATTACTCGTCGCTAAA

mismatches: 4
bulges: 0
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pre-miRNA
 CATTGCCATGTACTCCCTCCGTTCCAAATTACTCGTCGCTAAAATGGATGTATCTAGAATTAAAATACATCTAGATACATCCATACGTGCGACAAGTAAT
TCGGAACGGAGGGAGTATAATAGGAG

dot-bracket secondary structure
.....((.(((((((((((((((((.(((((((.(((((....(((((((((((((((...........)))))))))))))))....))))).))))))
).)))))))))))))))))...))..


SIMILARITIES
miRBase tae-MIR1136: 1e-41

PMRD tae-miR1136: 1e-41

microPC miR1135: 1e-47		UniProt no hits

RFAM MIR1122: 7e-43		most similar mature miRNAs

Identical with: miR1135 from microPC (MNEST045862)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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