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Species belonging to selected taxon:
Agrostis stolonifera
,
Avena barbata
,
Avena sativa
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Pseudoroegneria spicata
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Brachypodium distachyon
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST005892
species:
Triticum aestivum
miRNA family:
MIRf542
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGTGTCACTGAAATGTGGGC
miRNA*
CCTGCATGTCAGTGATCTTGA
mismatches:
3
bulges:
2
View larger
pre-miRNA
AGTTTCAGAATATGCCACTCC
ATGTGTCACTGAAATGTGGGC
ATGGGC
CCTGCATGTCAGTGATCTTGA
AGGGC
dot-bracket secondary structure
.............(((.((.(
(...((((((((.((((((((
....))
)).)))).))))))))..)).
)))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
download this record