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Species belonging to selected taxon:
Agrostis stolonifera
,
Avena barbata
,
Avena sativa
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Pseudoroegneria spicata
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Brachypodium distachyon
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST006000
species:
Triticum aestivum
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Triticum aestivum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAACTTACTTCCTCCGTCCAA
miRNA*
GGACGGAGGGAGTAAGACTCA
mismatches:
4
bulges:
0
View larger
pre-miRNA
TAGCTTTTCTG
AAACTTACTTCCTCCGTCCAA
AAATACTTGTCATCAAAATGGATGTATCTAGAACTAAAATACATCTATGATACATCTATTTCAATGAC
AAGTATTTCC
GGACGGAGGGAGTAAGACTCA
ACGATGGC
dot-bracket secondary structure
..(((..((((
(..((((((((((((((((..
(((((((((((((..(((((((((((((((((...........)))).)))))))))))))..)))))
))))))))..
))))))))))))))))..)))
..)).)))
SIMILARITIES
miRBase
tae-MIR1135
:
8e-18
PMRD
tae-miR1135
:
8e-18
microPC
miR1128
:
8e-21
UniProt
no hits
RFAM
MIR1122: 7e-34
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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