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Species belonging to selected taxon:

Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Populus trichocarpa, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST002110
species: Populus euphratica
miRNA family: MIR774
source: miRNEST

Taxonomy by NCBI:
Populus euphratica Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGAGAAGAAGATTTGGATGAT

miRNA*
TATGAGGAGCTTCTTGGCCGA

mismatches: 5
bulges: 0

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pre-miRNA
CTGGGGATGCAGGAGAAGAAGATTTGGATGATCATGCCAGGGAAGATGAAAATGGGGAGGGTGCTGACCTGCAGCAGCCACGATTCCCTTGGGATGGGAC
TGACCGTGATTATGATTATGAGGAGCTTCTTGGCCGAGTTTTCAA


dot-bracket secondary structure
.(((((((...((..((((((.(((..(((((((((((((((((........((....((.(((((.....))))).)).)).))))).))).((((...
...))))...)))))))))..))).))))))..))..))))))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|P55871|IF2B_MALDO: 0.0000000008

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





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