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Species belonging to selected taxon:

Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Populus trichocarpa, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST041286
species: Populus euphratica
source: miRBase, original name: peu-MIR2913 (MI0012637)

Taxonomy by NCBI:
Populus euphratica Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAGGTCGGGGATTGCAAGGAG

miRNA*
CCTCGCAATCCCCCAGCTC

mismatches: 3
bulges: 0

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pre-miRNA
GAGGTCGGGGATTGCAAGGAGAGCCAACGCATGGGCACGCGCACGGCAATTTAATGCCACGCCCACGCCAGCGTATAGCTCTCCTCGCAATCCCCCAGCT
C


dot-bracket secondary structure
(((.(.(((((((((.((((((((..((((...(((..(((...((((......)))).)))....))).))))...)))))))).))))))))).).))
)



SIMILARITIES
miRBase no hits

PMRD peu-miR2913: 1e-52

microPC no hits
UniProt no hits

RFAM no hits

Identical with: peu-miR2913 from PMRD (MNEST051329)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned

references

[1] Li B, Yin W, Xia X, Biochem Biophys Res Commun. 388:272-277(2009)., "Identification of microRNAs and their targets from Populus euphratica"




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