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Species belonging to selected taxon:

Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Populus trichocarpa, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST044951
species: Populus trichocarpa x Populus deltoides
miRNA family: MIR168
source: microPC, original name: miR168

Taxonomy by NCBI:
Populus trichocarpa x Populus deltoides Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGCTTGGTGCAGGTCGGGAA

miRNA*
CCCGCCTTGCATCAACTGA

mismatches: 3
bulges: 0

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pre-miRNA
TCGCTTGGTGCAGGTCGGGAACTGATTCGGCGATTTGATTGCCAGATGGCTAAACACGATTGGCTGTGAGGCAAATTATAAAAAGAAAGAGAATTGGATC
CCGCCTTGCATCAACTGA


dot-bracket secondary structure
(((.((((((((((.(((((.(..((((..(....((((((((..((((((((......))))))))..))).)))))......).....))))..).))
))).)))))))))).)))



SIMILARITIES
miRBase ptc-MIR168b: 1e-62

PMRD ptc-miR168b: 1e-62

microPC miR168: 1e-62
UniProt no hits

RFAM MIR168: 2e-61

Identical with: ptc-miR168b from PMRD (MNEST051651)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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