miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Carcinus maenas, Callinectes sapidus



ABOUT THIS RECORD

ID: MNEST009721
species: Carcinus maenas
miRNA family: mir-467
source: miRNEST

Taxonomy by NCBI:
Carcinus maenas Carcinus Portunidae Portunoidea Heterotremata Heterotremata/Thoracotremata group Eubrachyura Brachyura Pleocyemata Decapoda Eucarida Eumalacostraca Malacostraca Crustacea Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTGTGCATGTGCATGTGTGT

miRNA*
GAGTGTGTATGTACATGTT

mismatches: 3
bulges: 2

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pre-miRNA
AAAACCCGAGTGTGTATGTACATGTTGGAAAGTTATGAACCCAAAACTACGCTACCATGATCCTTTGTTCCACTGGCCAACTGTGTGTGTGTGCATGTGC
ATGTGTGT
GTGT


dot-bracket secondary structure
...((.((.(((((((((((((((((((..(((...((((..........................)))).)))..))))).......))))))))))))
))...)).
))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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