miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Prunus persica



ABOUT THIS RECORD

ID: MNEST002251
species: Prunus persica
miRNA family: MIR169
source: miRNEST

Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAGCCAAGAATGACTTGCTG

miRNA*
GCAAGTTGTTCTTGGTTCTGT

mismatches: 1
bulges: 0

View larger
pre-miRNA
AATTAATGCAGTTATGAAAAGGGTCTTGCATGAAAGGGTAGAGAGTGGAGCTGAGCCAAGAATGACTTGCTGCAATTAATCGAAGGTGAAGTAACAATTT
GTATATCGTTGGGCATACATACGCAGCAAGTTGTTCTTGGTTCTGTTTGGTTCTCTATGTTCTCATGTCAGACTCTTGGATGTGAGACTCTTGG


dot-bracket secondary structure
.........((((.((..((((((((.((((((.((.(((((((((.((((.(((((((((((((((((((((......((((....((.(((.......
.))).)).))))..........))))))))))))))))))))).)))).))))))))).)).)))))).)))))))).....)).)))).....



SIMILARITIES
miRBase aly-MIR169g: 0.00001

PMRD psl-miR169: 7e-56

microPC no hits
UniProt no hits

RFAM MIR169_2: 1e-54
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;