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Species belonging to selected taxon:

Prunus armeniaca, Prunus persica



ABOUT THIS RECORD

ID: MNEST002257
species: Prunus persica
miRNA family: MIRf459
source: miRNEST

Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTTTGTATTCTTCCACAGCTT

miRNA*
GCTGTGGGAAGATACAGATAG

mismatches: 2
bulges: 0

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pre-miRNA
CTCCATAAACGATGATCCTCTTTGTATTCTTCCACAGCTTTCTTGAACTGCATCCATGAGATCGATCGATCTTTGCATGTGATGCTGCAGTCACTCACTC
ACTCTCTCTCTAACTGGCTTGCGGGTCAATAAAGCTGTGGGAAGATACAGATAGGCTCAATAAAAAATCA


dot-bracket secondary structure
............(((.(((.((((((((.((((((((((((.((((.(((((.(((.((((..((..((....((...(((((......))))).)).))
..))..))))....)))..))))).)))).)))))))))))).)))))))).))).)))...........



SIMILARITIES
miRBase csi-MIR396b: 0.000000000000002

PMRD gma-miR396a: 0.000000000000002

microPC miR396: 4e-57
UniProt no hits

RFAM MIR396: 0.0000000000007
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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