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Species belonging to selected taxon:
Pseudoroegneria spicata
ABOUT THIS RECORD
ID:
MNEST002284
species:
Pseudoroegneria spicata
miRNA family:
MIR1122
source:
miRNEST
Taxonomy by NCBI:
Pseudoroegneria spicata
Pseudoroegneria
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCGTCCGAAAAAG
miRNA*
TTTTCGGACGGAGGGAGTATG
mismatches:
0
bulges:
0
View larger
pre-miRNA
TTGGACCTTAG
TACTCCCTCCGTCCGAAAAAG
ATTGTCTCTCAAATGGATGTATCTAGCACCAAGTTAGTGCTAGATACATCCATTTGAGGCACAAGCTT
GGGACAAGCT
TTTTCGGACGGAGGGAGTATG
TGCTAATA
dot-bracket secondary structure
((((......(
(((((((((((((((((((((
.((((((((((((((((((((((((((((.......)))))))))))))))))))))(((....))).
))))))).))
)))))))))))))))))))).
..))))..
SIMILARITIES
miRBase
tae-MIR1133
:
1e-41
PMRD
tae-miR1133
:
1e-41
microPC
miR1133
:
0.0004
UniProt
no hits
RFAM
MIR1122: 3e-42
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record