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Species belonging to selected taxon:

Pseudoroegneria spicata



ABOUT THIS RECORD

ID: MNEST002295
species: Pseudoroegneria spicata
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCCTGATCATCATCTTCA

miRNA*
AAGGTGTAGGTTTGGCTGGGC

mismatches: 4
bulges: 0

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pre-miRNA
CATGTCCTGATGAAGGTGTAGGTTTGGCTGGGCTGTTATCAACAGGTTCATCTTTCGGTTGATCCGTCTGCTTTGGAGCAAGCACTGGAGATGACTCATC
ATCCTGATCATCATCTTCA
TCATCATCA


dot-bracket secondary structure
.(((...(((((((((((..((((.((.(((...((((((..((((((..(((...(((.((....)).)))..)))...))).)))..))))))...))
).)).))))..))))))))
))).)))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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