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Species belonging to selected taxon:
Nasonia vitripennis
,
Nasonia giraulti
ABOUT THIS RECORD
ID:
MNEST037662
species:
Nasonia vitripennis
miRNA family:
mir-279
source:
miRBase, original name:
nvi-mir-279
(
MI0014742
)
Taxonomy by NCBI:
Nasonia vitripennis
Nasonia
Pteromalinae
Pteromalidae
Chalcidoidea
Chaldicoidea group
Apocrita
Hymenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACTAGATCCACACTCATTAA
miRNA*
AGTGAGTGATGGTCTGGTGCACG
mismatches:
1
bulges:
3
View larger
pre-miRNA
CCATCGGACAACGACCAGCCGATTGTACTG
AGTGAGTGATGGTCTGGTGCACG
GTTTATCGATCTG
TGACTAGATCCACACTCATTAA
GTACGTTCGGCT
dot-bracket secondary structure
...(((.....)))..((((((.((((((.
((((((((.(((((((((.((((
(.........)))
)))))))).))))))))))).)
))))).))))))
SIMILARITIES
miRBase
ame-mir-279
:
0.00000000002
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-279: 2e-42
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van,
Science. 327:343-348(2010).
,
"Functional and evolutionary insights from the genomes of three parasitoid Nasonia species"