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Species belonging to selected taxon:

Quercus petraea, Quercus robur



ABOUT THIS RECORD

ID: MNEST002308
species: Quercus petraea
miRNA family: MIR403
source: miRNEST

Taxonomy by NCBI:
Quercus petraea Quercus Fagaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTAGATTCACGCACAAACTCT

miRNA*
AGTTTGTGCGTGAATCCGACC

mismatches: 3
bulges: 0

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pre-miRNA
AAGAGAGATGGGACCTATCTCAAGTTTGTGCGTGAATCCGACCCCATCACATTTGTTCATTTTTAATCATGCCATACCATCCGATGGTGTTAGATTCACG
CACAAACTCT
TGATTTGTCTCCTCTGCAA


dot-bracket secondary structure
.....(((.(((((..(((...((((((((((((((((.(((.(((((..................................))))).))).))))))))
))))))))..
.)))..))))).)))....



SIMILARITIES
miRBase tcc-MIR403b: 0.0000000000001

PMRD ptc-miR403b: 0.0000001

microPC miR403: 0.000006
UniProt no hits

RFAM MIR403: 0.000000008
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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