miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Caenorhabditis elegans, Ancylostoma caninum, Heterorhabditis bacteriophora, Caenorhabditis japonica, Caenorhabditis brenneri, Strongyloides ratti, Caenorhabditis remanei, Nippostrongylus brasiliensis, Strongyloides stercoralis, Ancylostoma ceylanicum



ABOUT THIS RECORD

ID: MNEST009835
species: Strongyloides stercoralis
miRNA family: miR-1725
source: miRNEST

Taxonomy by NCBI:
Strongyloides stercoralis Strongyloides Strongyloididae Panagrolaimoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATGATATAATTAGAGCTGAT

miRNA*
CACTTCTGACTGTAGTAATATT

mismatches: 5
bulges: 1

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pre-miRNA
TATATAAGATGTATGACGCTACAGTGTCATCATTCAATTTTAATGGAACACTCACTTCTGACTGTAGTAATATTGGTATAGAAGAAATGGATGAATATGA
TATAATTAGAGCTGAT
AGGATAAGAAAATTTATGTTTCCTGAATTTTCTATAGATTCAGGATTTG


dot-bracket secondary structure
.......((((.(((((((....))))))))))).................(((.((((((.((((...(((((.((.((.......)).)).)))))..
)))).)))))).))).
...(((((....)))))...((((((((((.....))))))))))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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