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Species belonging to selected taxon:
Caenorhabditis elegans
,
Ancylostoma caninum
,
Heterorhabditis bacteriophora
,
Caenorhabditis japonica
,
Caenorhabditis brenneri
,
Strongyloides ratti
,
Caenorhabditis remanei
,
Nippostrongylus brasiliensis
,
Strongyloides stercoralis
,
Ancylostoma ceylanicum
ABOUT THIS RECORD
ID:
MNEST009835
species:
Strongyloides stercoralis
miRNA family:
miR-1725
source:
miRNEST
Taxonomy by NCBI:
Strongyloides stercoralis
Strongyloides
Strongyloididae
Panagrolaimoidea
Rhabditida
Chromadorea
Nematoda
Pseudocoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TATGATATAATTAGAGCTGAT
miRNA*
CACTTCTGACTGTAGTAATATT
mismatches:
5
bulges:
1
View larger
pre-miRNA
TATATAAGATGTATGACGCTACAGTGTCATCATTCAATTTTAATGGAACACT
CACTTCTGACTGTAGTAATATT
GGTATAGAAGAAATGGATGAA
TATGA
TATAATTAGAGCTGAT
AGGATAAGAAAATTTATGTTTCCTGAATTTTCTATAGATTCAGGATTTG
dot-bracket secondary structure
.......((((.(((((((....))))))))))).................(
((.((((((.((((...(((((
.((.((.......)).)).))
)))..
)))).)))))).))).
...(((((....)))))...((((((((((.....))))))))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record