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Species belonging to selected taxon:

Helobdella robusta



ABOUT THIS RECORD

ID: MNEST008760
species: Helobdella robusta
miRNA family: miR-4172
source: miRNEST

Taxonomy by NCBI:
Helobdella robusta Helobdella Glossiphoniidae Rhynchobdellida Hirudinea Hirudinida Clitellata Annelida Annelida/Echiura/Pogonophora group Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATTATGTCATATATTTAG

miRNA*
AAGAATATTACAGAATAAA

mismatches: 3
bulges: 0

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pre-miRNA
AATTTATTATGTCATATATTTAGTATCTAAAATCTCGCACAACCATTATTTTTTTGCTGTTTGTCTAAGAATATTACAGAATAAAA

dot-bracket secondary structure
..((((((.(((.((((.(((((....((((.....(((.((.........)).)))..)))).))))).)))).))).)))))).


SIMILARITIES
miRBase cin-mir-4172: 0.0002

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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