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Species belonging to selected taxon:
Mus musculus
,
Rattus norvegicus
,
Peromyscus maniculatus bairdii
,
Cavia porcellus
,
Peromyscus polionotus subgriseus
ABOUT THIS RECORD
ID:
MNEST005072
species:
Mus musculus
miRNA family:
miR-1346
source:
miRNEST
Taxonomy by NCBI:
Mus musculus
Mus
Mus
Murinae
Muridae
Muroidea
Sciurognathi
Rodentia
Glires
Euarchontoglires
Eutheria
Theria
Mammalia
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGGGGTTGGGGGCGGGGGCAG
miRNA*
GCCCCTTCCTCTGTAAACCCAG
mismatches:
4
bulges:
1
View larger
pre-miRNA
CAAAATATTACT
GCCCCTTCCTCTGTAAACCCAG
ACAAGTTTCCCTCACTTTTCTCTGAGCATCTCTCAAGCATTT
GGGGGTTGGGGGCGGGGGCAG
AGG
AGAAAT
dot-bracket secondary structure
..........((
((((((.((((((....(((((
(...((((..((((........))))........)))).)))
)))...)))))).))))))))
...
......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record