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Species belonging to selected taxon:
Fragaria vesca
,
Fragaria x ananassa
,
Prunus armeniaca
,
Prunus persica
ABOUT THIS RECORD
ID:
MNEST045844
species:
Fragaria vesca
source:
microPC, original name:
miR159
Taxonomy by NCBI:
Fragaria vesca
Fragaria
Potentilleae
Rosodae
Rosoideae
Rosaceae
Rosales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGATTGAAGGGAGCTCTA
miRNA*
GAGCTCCTTGAAGTCCAATA
mismatches:
2
bulges:
0
View larger
pre-miRNA
TG
GAGCTCCTTGAAGTCCAATA
GAAGATGTTGCTAGGTTGATTGAGCTGCTGAGCTATGAATTCCACACTTCTATCTCTGTTTTTTGATAAAGATGATAG
GCTTGTGGCTTGCATACCTCAGGAGCTGCATTACCTGAGTTGCATCATGTT
TTGGATTGAAGGGAGCTCTA
dot-bracket secondary structure
((
(((((((((..(((((((.(
.(.(((((.(((((((....((((((.(((((.((((....(((((..(((((((((............))).)))))
)..)))))....)))).))))).)))).))..)))).))).))))).).).
)))))))..)))))))))))
SIMILARITIES
miRBase
ptc-MIR159b
:
6e-16
PMRD
ptc-miR159b
:
6e-16
microPC
miR159
:
4e-94
UniProt
no hits
RFAM
MIR159: 7e-16
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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