miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Fragaria vesca, Fragaria x ananassa, Prunus armeniaca, Prunus persica



ABOUT THIS RECORD

ID: MNEST002247
species: Prunus persica
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCTCTTCCTCTTCTTCTTCTT

miRNA*
GAGAGTTTGGGAGGAGGTT

mismatches: 4
bulges: 2

View larger
pre-miRNA
CATATTCCCAAGCTCTTCCTCTTCTTCTTCTTCCTTTGCCATGTCAACTGAATCTTCTGGAAAAGTGAAAGTAGAAGGGGAGTGCATTCATTTCGGTGGA
GAAATCGAGTAGGGGTGCATTTCTGTAAATACTTGGGATTCTTTGGGCTAACATTTTCGGTTTAGGTGGTGAAAGAAGAGAGTTTGGGAGGAGGTTAGGA
TTAA


dot-bracket secondary structure
..((.(((.((.((((((((...(((..(((((.((((((((...(((((((.....(((.((((...(((((....((((((((((((..((((((...
...))))))...)))))))))))).....)))))......))))...))).....)))))))...)))))))).))))))))...)))))))).)).)))
.)).



SIMILARITIES
miRBase aly-MIR159b: 0.0006

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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