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Species belonging to selected taxon:

Fragaria vesca, Fragaria x ananassa



ABOUT THIS RECORD

ID: MNEST000693
species: Fragaria vesca
miRNA family: MIR1065
source: miRNEST

Taxonomy by NCBI:
Fragaria vesca Fragaria Potentilleae Rosodae Rosoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCAGTCTCTGACTTCTCGCCT

miRNA*
TTGAGGAGAATGGAGGCGAAG

mismatches: 4
bulges: 2

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pre-miRNA
CAAGGCGGGGTTGCATCTCAAACGTTCGTCTTCAGTCTCTGACTTCTCGCCTGCGGCGGCGACGGCGGGGACGGCTGGGGTGAGAGAGGAGGAAGCAACG
ACGTGTCGTGTGCCGAGGCCGTGTGTGGTGCCTCTGATGAGAACGTGCTCGCTTCCGAGTGAAACGGAGGAGGAATGGAGGAAGAGGAAGGAGCTGCAGA
GCTTGAGGAGAATGGAGGCGAAGAGGAAGCGGTCGGAGAAGCAGCAGAGGA


dot-bracket secondary structure
.........(((((.((((...(((((.(((((.(((((((.(((((((...((.(((((..(((((...(((((((..((................)).
.)).))))).)))))..))))).((((((.(((((........(((.((..((((((.......)))))).)).))).....))))).....))))))..
)).)))))))..)))))))))))).))).))....)))).)))))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q94F39|AFP3_ARATH: 0.0000000000008

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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