miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Bos taurus, Ovis aries, Bos indicus, Bos sp., Capra hircus



ABOUT THIS RECORD

ID: MNEST005348
species: Bos taurus
miRNA family: miR-1408
source: miRNEST

Taxonomy by NCBI:
Bos taurus Bos Bovinae Bovidae Pecora Ruminantia Cetartiodactyla Laurasiatheria Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTGGAGGGAGGGTGGTGGCA

miRNA*
CCACCAGCTGTCTATCACGTG

mismatches: 4
bulges: 0

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pre-miRNA
GTGAGTGTGGAGGGAGGGTGGTGGCAGGGAAGGGATGGGATTGGTCTGCTTCTGGGATCTCATTCCTCTCCTCTCCACGCAGCTCGAGCAGAGGGGCAGG
CTGCAGAAGTCAGTGGCAAAGGAGATCCAGGCCCCAGACCCGGCTGACATTCGAATCCTACGTGGCCACCAGCTGTCTATCACGTGTT


dot-bracket secondary structure
.....(((((.(((.((.(((((((......(((((..((...(((.(((((((((.(((......((((((..((((((((((...((......)).))
))))........))))...))))))...))).))))))...))).)))..))..))))).....))))))).)).))).)))))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q91WM3|U3IP2_MOUSE: 0.00000000003

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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