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Species belonging to selected taxon:

Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Populus trichocarpa, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST052616
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf10794-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCCAGGTGGCACTCGGGTTTTCC

miRNA*
 GAAGACCTAAGCGCCAGGTGGCAT

mismatches: 5
bulges: 1
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pre-miRNA
 CCCTTTGCGAAGACCTAAGCGCCAGGTGGCATTGGGGTCTGTCCAGAGCATTGAATCAGCCACAGTGCCAGGTGGCACTCGGGTTTTCCTTAGCGG

dot-bracket secondary structure
((((..(.(((((((..((.((((..((((((((.((.(((..(((....)))...))))).))))))))..)))).))..))))))))..)).))


SIMILARITIES
miRBase no hits

PMRD ptc-miRf12360-akr: 0.00002

microPC no hits		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
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