miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Salmo salar
ABOUT THIS RECORD
ID:
MNEST006889
species:
Salmo salar
miRNA family:
miR-2345
source:
miRNEST
Taxonomy by NCBI:
Salmo salar
Salmo
Salmoninae
Salmonidae
Salmonoidei
Salmoniformes
Protacanthopterygii
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGTGTGTTTTCTGATTTCA
miRNA*
AAGTCAAGACAGTCGAGAT
mismatches:
2
bulges:
2
View larger
pre-miRNA
ACAAAAAAAGCACCCACGGTA
TTTGTGTGTTTTCTGATTTCA
CTCTATTACAGGGTAACGTTATACCTTGTTGTGGGTTGCTATGTGATAGTTTTGTTGT
CAACTAATTGTTACCGTATTGTCCCGTGCTGTTTAAGTACAGCAAGGTAAATGTTATAGAAAGACTG
AAGTCAAGACAGTCGAGAT
TCTCTGTGTGTGTA
TATT
dot-bracket secondary structure
.........((((.(((((..
((((..(((((..((((((((
.(((.((.....((((((((.((((((((((((((.(((...(((((((((..(((..
.))).))))))))).)))....)))..(((.....)))))))))))))))))))))).)).))).))
)))))))))))..))))..
...))))).)))).
....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record