miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Paullinia cupana var. sorbilis, Citrus clementina



ABOUT THIS RECORD

ID: MNEST003137
species: Citrus clementina
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Citrus clementina Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCTCTTCCTCTTCCTCTTCCT

miRNA*
AAAAAGAAAGAGAGAGAAGAA

mismatches: 5
bulges: 0

View larger
pre-miRNA
AAGAGAGAAAAAGAAAGAGAGAGAAGAAAGAGTCTCATCAACATCAATCATCACCATCAGCTTCCTCAATCAACGTCAGCATCAGCATCACTACCATCAG
CACCTGCGCCTGGATGTAAGTTAAGTTGGATGATCATCGTCGTCATAACGTCAACAACAAATCAGTAGTAATGGCAGGACTAATATACGAAATATTCACA
TCGTCATCGCTACTATCACTGGGCCTCTACCACACGATCTGCACGACGCGCAACTACCTGAAATCACCGCAATCGTACGGCGCCAAACCCTACCACCCAC
TCCCACTCCATCACAGCCACCACCGCCTCAAGCACCTCCAGCTGTACCTGATAATCGTCTGCCTCCTCATCTCCTTCGTCCACCAAATCCTAACCGCATC
CGACTCCGACCCGCTCGTTAAGGGCCGGACCCCCGTCCACCTCTTCGCCTCCCTCCAGTCCGCGCTCGTCCTCTTCCTCTTCCTCTTCCTCTCCCTCTC


dot-bracket secondary structure
..(((((.((.((.(((((.((((.((..((.........................)).(((...............)))....((.............)
).(..(((((((((.....((.(((.((((((((((.((((((((...(((..........(((((.(((.((((..(((.(((((.....)))))....
..)))...)))).))).)))))...........)))...)).)))))).((.................))....(((((((...................
........................................))))))).))))..(((..(((.................................)))..
))).((((.(((.........))).))))....))))))...))).)).....)))))...))))..))).)))).))))).)).)).)))))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;