miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Paullinia cupana var. sorbilis, Citrus clementina



ABOUT THIS RECORD

ID: MNEST000447
species: Citrus unshiu
miRNA family: MIR2911
source: miRNEST

Taxonomy by NCBI:
Citrus unshiu Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGCCGGGGGACGGACTGGGAA

miRNA*
CCCAGTCCCGAACCCGTCGG

mismatches: 5
bulges: 1

View larger
pre-miRNA
TCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTNGGCGGACTGCTCGAGCTGCCACCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCC
GGGGGACGGACTGGGAA
CGGTCCTTTCGGGGGCCTT


dot-bracket secondary structure
((((...((...)).))))..(((((((((....(((((((((((..(((((.((((((..(((((....)))))..)))))).))))).)).))))).)
)))....))))))))).
.((((((....))))))..



SIMILARITIES
miRBase peu-MIR2911: 9e-33

PMRD peu-miR2911: 9e-33

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record





Liczniki na strone;