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Species belonging to selected taxon:
Gallus gallus
,
Taeniopygia guttata
,
Meleagris gallopavo
,
Lonchura striata domestica
ABOUT THIS RECORD
ID:
MNEST006829
species:
Gallus gallus
miRNA family:
miR-1648
source:
miRNEST
Taxonomy by NCBI:
Gallus gallus
Gallus
Phasianinae
Phasianidae
Galliformes
Neognathae
Aves
Coelurosauria
Theropoda
Saurischia
Dinosauria
Archosauria
Sauria
Sauropsida
Amniota
Tetrapoda
Sarcopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGCTCGGCTCGGCTCGGCTC
miRNA*
GCTCGGCTCGGCTCGGTCGGC
mismatches:
4
bulges:
0
View larger
pre-miRNA
AGCCAGATCGC
CGGCTCGGCTCGGCTCGGCTC
GGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCG
GCTCGGCTCGGCTCGGTCGGC
T
CGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGTCGGCTCGCCCCT
dot-bracket secondary structure
.........((
(((((.((((.((((.((((.
((((.((((.((((.((((.(((.(((((.((((.((((.(((...
))).)))).)))).)))))))
)
.)))).)))).)))).)))).)))).)))).)))).)))))))........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q8C0X2|NHDC1_MOUSE: 0.00001
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record