miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gallus gallus, Taeniopygia guttata, Meleagris gallopavo, Lonchura striata domestica



ABOUT THIS RECORD

ID: MNEST009705
species: Lonchura striata domestica
miRNA family: miR-4188
source: miRNEST

Taxonomy by NCBI:
Lonchura striata domestica Lonchura striata Lonchura Estrildinae Estrildidae Passeroidea Passeriformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAAAATGCAATTTTTAAATGC

miRNA*
TTTTGAATGTTGCCATACC

mismatches: 4
bulges: 2

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pre-miRNA
TAAAGCAGAATAATCATTCAGCTTTTGAATGTTGCCATACCATAACTTTAATTTGTTTCTGTTAAACTGTATACCTGTTGTATGCAAGCTTTCTAGAATT
CTCAGAGGTAAAATGCAATTTTTAAATGCTTTTGGTTTCTGCTATTTT


dot-bracket secondary structure
...(((((((..((((...(((.((((((.(((((..((((..........((((.(((((..((.((((((((.....)))))).)).))..)))))..
..))))))))....))))).)))))).)))..))))))))))).....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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