ABOUT THIS RECORDspecies: Schistosoma mansoni
miRNA family: miR-3492
source: miRNEST
Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATCCGTGCTGAGATTTCGTCA miRNA* ACGCAGGTCAGTCCCGGAGTA mismatches: 4 bulges: 2 |
pre-miRNA
GAGCTTTCTGAATCCGTGCTGAGATTTCGTCAGACACCAACCTATTAGGGCTGATCAGACTTCCAAGATAAGTGAAGTTGTCGACGCGTTCGACTACTTT
ACTCCCTATCCTTAGTTCAGGTGTTGACGCAGGTCAGTCCCGGAGTAACAATTTA
dot-bracket secondary structure
........((..((((.(((((..((.(((((.(((((...(((.(((((...(((..........))).((((((((.(((((.....))))).)))))
))))))))....)))....)))))))))).)).)))))..)))).))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
GAGCTTTCTGAATCCGTGCTGAGATTTCGTCAGACACCAACCTATTAGGGCTGATCAGACTTCCAAGATAAGTGAAGTTGTCGACGCGTTCGACTACTTT
ACTCCCTATCCTTAGTTCAGGTGTTGACGCAGGTCAGTCCCGGAGTAACAATTTA
dot-bracket secondary structure
........((..((((.(((((..((.(((((.(((((...(((.(((((...(((..........))).((((((((.(((((.....))))).)))))
))))))))....)))....)))))))))).)).)))))..)))).))........
SIMILARITIES| miRBase sja-mir-3499: 0.0000005 PMRD no hits microPC no hits | UniProt no hits RFAM Hammerhead_1: 0.00000004 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
