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Species belonging to selected taxon:

Schistosoma mansoni, Schistosoma japonicum



ABOUT THIS RECORD

ID: MNEST007490
species: Schistosoma mansoni
miRNA family: miR-3492
source: miRNEST

Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATCCGTGCTGAGATTTCGTCA

miRNA*
ACGCAGGTCAGTCCCGGAGTA

mismatches: 4
bulges: 2

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pre-miRNA
GAGCTTTCTGAATCCGTGCTGAGATTTCGTCAGACACCAACCTATTAGGGCTGATCAGACTTCCAAGATAAGTGAAGTTGTCGACGCGTTCGACTACTTT
ACTCCCTATCCTTAGTTCAGGTGTTGACGCAGGTCAGTCCCGGAGTAACAATTTA


dot-bracket secondary structure
........((..((((.(((((..((.(((((.(((((...(((.(((((...(((..........))).((((((((.(((((.....))))).)))))
))))))))....)))....)))))))))).)).)))))..)))).))........



SIMILARITIES
miRBase sja-mir-3499: 0.0000005

PMRD no hits

microPC no hits
UniProt no hits

RFAM Hammerhead_1: 0.00000004
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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