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Species belonging to selected taxon:
Schistosoma mansoni
,
Schistosoma japonicum
ABOUT THIS RECORD
ID:
MNEST044077
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-3038
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAAAGGACGAGTGTACCGTGT
miRNA*
ACTCGTACACTCGTCCTTTGGT
mismatches:
2
bulges:
1
View larger
pre-miRNA
TGTATCTTTATC
ACTCGTACACTCGTCCTTTGGT
TAGCAAGCGGATAAC
CAAAGGACGAGTGTACCGTGT
AGCAATTTGC
dot-bracket secondary structure
.(((.......(
((..((((((((((((((((((
((.........))))
)))))))))))))))).))).
.......)))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
sja-miR-3058
from Huang et al. (
MNEST044076
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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