miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Schistosoma mansoni, Schistosoma japonicum



ABOUT THIS RECORD

ID: MNEST044028
species: Schistosoma japonicum
source: Huang et al., original name: sja-miR-3119

Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGATGTTCACAGTGGGATTTT

miRNA*
CGTCCTATTTGGGACTCATCGGCT

mismatches: 6
bulges: 2

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pre-miRNA
AGGACGAGCGTTTCGTCCTATTTGGGACTCATCGGCTTGATGTACGTGCATCCCAATGTTGATGTTCACAGTGGGATTTTAACTCAGTCC

dot-bracket secondary structure
.(((((((......((((((((...((..(((((((..(((((....))))).....))))))).))..)))))))).....))).))))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM Hammerhead_1: 0.00000000008

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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