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Species belonging to selected taxon:
Schistosoma mansoni
,
Schistosoma japonicum
ABOUT THIS RECORD
ID:
MNEST044055
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-125
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCCTGAGACTGATAATTGCT
miRNA*
CAATTATTATTCTCAGGTGTA
mismatches:
3
bulges:
0
View larger
pre-miRNA
ATGAATAAAA
TCCCTGAGACTGATAATTGCT
CTAGTTATTATATCATTAATGAGTTTACAATAAGGG
CAATTATTATTCTCAGGTGTA
TCATTCATGA
dot-bracket secondary structure
((((((.(.(
..(((((((.(((((((((((
((.(((......(((....)))......))).))))
))))))))).)))))))..).
).))))))..
SIMILARITIES
miRBase
sja-mir-125b
:
7e-39
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
sja-Novel-148
from Hao et al. (
MNEST044208
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record