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Species belonging to selected taxon:
Schistosoma mansoni
,
Schistosoma japonicum
ABOUT THIS RECORD
ID:
MNEST044085
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-3031
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATCCGTGCTGAGATTTCGTCT
miRNA*
ATGAGACTCCACAGATAC
mismatches:
2
bulges:
3
View larger
pre-miRNA
AGCTTCCTGT
ATCCGTGCTGAGATTTCGTCT
GTCACCAGGCCACCAGCACTG
ATGAGACTCCACAGATAC
GTGAAGCG
dot-bracket secondary structure
.(((((.(((
(((.(((..(((.(((((((.
((......((.....)))).)
)))))))))))).)))))
).))))).
SIMILARITIES
miRBase
sja-mir-3492
:
5e-39
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
Hammerhead_1: 0.000001
Identical with:
sja-mir-3492
from miRBase (
MNEST039015
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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