miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Schistosoma mansoni, Schistosoma japonicum



ABOUT THIS RECORD

ID: MNEST007488
species: Schistosoma mansoni
miRNA family: miR-1196
source: miRNEST

Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGATCTGCCTGCCTCTGCCTC

miRNA*
GGTAGACCAGGCTGGCCTCG

mismatches: 5
bulges: 1

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pre-miRNA
GAGGCTGTCCTGGAACTCGATTGGTAGACCAGGCTGGCCTCGAACTCACAGAGATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAG

dot-bracket secondary structure
......(((((((.(((((...((((((.(((((.((.(((.........))).)).)))))..))))))...))))).))))))).....


SIMILARITIES
miRBase mmu-mir-3470a: 5e-18

PMRD no hits

microPC no hits
UniProt no hits

RFAM 7SK: 0.000000005
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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