miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Schistosoma mansoni
,
Schistosoma japonicum
ABOUT THIS RECORD
ID:
MNEST044018
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-3136
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGAGCTTATGGTGGATTGTCA
miRNA*
TTAACCCTATACAAGCTCTCT
mismatches:
2
bulges:
4
View larger
pre-miRNA
CCAGTGAAGTATA
TTAACCCTATACAAGCTCTCT
ACTCGAACAGTACATGTCGAGTC
AGAGCTTATGGTGGATTGTCA
TCGGAACTGA
dot-bracket secondary structure
.((((...(.((.
.((((((((((..((((((..
((((((.((.....)))))))).
))))))))))).)).)))..)
))...)))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record