miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Schistosoma mansoni, Schistosoma japonicum



ABOUT THIS RECORD

ID: MNEST007486
species: Schistosoma mansoni
miRNA family: miR-2154
source: miRNEST

Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCAGCTGTACAAATGGCATTG

miRNA*
 ACCCAGTGTTCAGCTGGAC

mismatches: 3
bulges: 2
View larger
pre-miRNA
 TTTCCTGTTCCTCAGCTGTACAAATGGCATTGAGACGTATATCCAAAGAGTCACAGGACTTAAGTGTAGATCCTCCAACCCAGTGTTCAGCTGGACCTAT
TCAC

dot-bracket secondary structure
...........(((((((.(((..(((..(((.(((.............)))..((((.(((....))).)))).))).))).))).)))))))......
....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|P25867|UBCD1_DROME: 0.0002

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




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