miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Drosophila melanogaster, Drosophila simulans, Glossina morsitans morsitans, Drosophila sechellia, Drosophila auraria, Drosophila pseudoobscura, Teleopsis dalmanni, Drosophila willistoni, Drosophila ananassae, Drosophila virilis, Drosophila erecta, Drosophila grimshawi, Ceratitis capitata, Drosophila mojavensis, Cochliomyia hominivorax, Haematobia irritans irritans, Drosophila yakuba



ABOUT THIS RECORD

ID: MNEST009646
species: Cochliomyia hominivorax
miRNA family: miR-1369
source: miRNEST

Taxonomy by NCBI:
Cochliomyia hominivorax Cochliomyia Chrysomyini Chrysomyinae Calliphoridae Oestroidea Calyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGGGGAGGAGGGAGAGTTTT

miRNA*
 AGCATTAATTTCTTTTAACAAT

mismatches: 5
bulges: 1
View larger
pre-miRNA
 CAATCGTATTGACTAATGTTGTAGCATTAATTTCTTTTAACAATTATAGTGCAAATAGGGAAATTAAACACTTTTGGGGGAGGAGGGAGAGTTTTAATAA
TCGTCAGGAGGGAA

dot-bracket secondary structure
...((...(((((...(((((.(((.((..((((((((..(((....((((.................)))).)))..)))))))).)).))).))))).
..)))))..))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




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