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Species belonging to selected taxon:

Ictalurus punctatus, Ictalurus furcatus



ABOUT THIS RECORD

ID: MNEST007019
species: Ictalurus punctatus
miRNA family: mir-46
source: miRNEST

Taxonomy by NCBI:
Ictalurus punctatus Ictalurus Ictaluridae Siluriformes Siluriphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTCATGGAGCTGCTCTTCTC

miRNA*
GGAGAGCTGTTAAGACAGA

mismatches: 4
bulges: 2

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pre-miRNA
TTCTTTTTATATGTCATGGAGCTGCTCTTCTCCCACCTTGTGACAGTAAGATCTACTGCACGGGAGAGCTGTTAAGACAGATACAGATG

dot-bracket secondary structure
...(((.(((.((((.(((....((((((((........(((.(((((.....))))))))))))))))..))).)))).))).)))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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