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Species belonging to selected taxon:

Ictalurus punctatus, Ictalurus furcatus



ABOUT THIS RECORD

ID: MNEST007764
species: Ictalurus furcatus
miRNA family: miR-1603
source: miRNEST

Taxonomy by NCBI:
Ictalurus furcatus Ictalurus Ictaluridae Siluriformes Siluriphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTGGTTTGTTTTGTGTTTTCC

miRNA*
AATACACCACACAGCATCATCA

mismatches: 4
bulges: 1

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pre-miRNA
ACGCATCTTCTCGTCTAGTAGGTGGTTTGTTTTGTGTTTTCCTTGCACACAGGAATACACCACACAGCATCATCATTACTGAAGCTCCAACAG

dot-bracket secondary structure
...(((((.((.....)).)))))...(((...((((.(((((.......))))).)))).))).(((.(((.......))).))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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