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Species belonging to selected taxon:
Oryzias latipes
,
Gasterosteus aculeatus
,
Fundulus heteroclitus
,
Poecilia reticulata
ABOUT THIS RECORD
ID:
MNEST006678
species:
Oryzias latipes
miRNA family:
miR-2452
source:
miRNEST
Taxonomy by NCBI:
Oryzias latipes
Oryzias
Oryziinae
Adrianichthyidae
Adrianichthyoidei
Beloniformes
Atherinomorpha
Smegmamorpha
Percomorpha
Euacanthopterygii
Acanthopterygii
Holacanthopterygii
Euacanthomorpha
Acanthomorpha
Ctenosquamata
Eurypterygii
Neoteleostei
Neognathi
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTCTGTTTGTTTTCCTTTTT
miRNA*
GGAAGAGGACAAAAAAGACGCT
mismatches:
4
bulges:
1
View larger
pre-miRNA
TACGACACATTTGCCTTTTAGCATAGCTAGC
TTTCTGTTTGTTTTCCTTTTT
TTGTTTTGTTTCCATGATATTAA
GGAAGAGGACAAAAAAGACGCT
GAT
AGCCGTTTAAAGGCAAAAATGTTAT
dot-bracket secondary structure
...((((..(((((((((.(((...((((((
..(((.(((((((((.(((((
.((((.((....)).))))..))
))).)))))))))..))).)))
...
))).))).)))))))))..))))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record