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Species belonging to selected taxon:
Ipomoea batatas
,
Nicotiana benthamiana
,
Nicotiana langsdorffii x Nicotiana sanderae
,
Nicotiana tabacum
,
Petunia axillaris subsp. axillaris
,
Solanum habrochaites
,
Solanum lycopersicum
,
Solanum melongena
,
Solanum pennellii
,
Solanum torvum
,
Capsicum annuum
,
Solanum tuberosum
,
Ipomoea nil
ABOUT THIS RECORD
ID:
MNEST045307
species:
Nicotiana benthamiana
source:
microPC, original name:
miR169
Taxonomy by NCBI:
Nicotiana benthamiana
Nicotiana
Nicotianeae
Nicotianoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGTCAAGGATGACTTGCC
miRNA*
CAAGTTTCCTTGTCT
mismatches:
1
bulges:
1
View larger
pre-miRNA
AGTCAAGGATGACTTGCC
TGCACACTTNGGAAAAGATTTTTACAAATGGTACTTTCCTTTCTTGGTTTCAGG
CAAGTTTCCTTGTCT
dot-bracket secondary structure
((.((((((.((((((((
((...(((...((((.((....(((.....)))...)).))))..)))..))))
)))))))))))).))
SIMILARITIES
miRBase
sly-MIR169b
:
0.0003
PMRD
sly-miR169b
:
0.0003
microPC
miR169
:
0.001
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
download this record