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Species belonging to selected taxon:

Ipomoea batatas, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST001651
species: Nicotiana tabacum
miRNA family: MIR393
source: miRNEST

Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCCAAAGGGATCGCATTGATC

miRNA*
 TCATGCGATCTCTTCGGATT

mismatches: 1
bulges: 1
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pre-miRNA
 TGGTGGAGTATTCCAAAGGGATCGCATTGATCCTGTGTCCCAATTTGAGTCCAATGGGATCATGCGATCTCTTCGGATTTCTCCATA

dot-bracket secondary structure
..((((((...(((.((((((((((((.((((((((.................)))))))))))))))))))).)))...)))))).


SIMILARITIES
miRBase ptc-MIR393d: 0.0000003

PMRD ptc-miR393d: 0.0000003

microPC miR393: 9e-32		UniProt no hits

RFAM no hits		most similar mature miRNAs

Identical with: miR393 from microPC (MNEST045319)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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Liczniki na strone;