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Species belonging to selected taxon:
Solanum habrochaites
,
Solanum lycopersicum
,
Solanum melongena
,
Solanum pennellii
,
Solanum torvum
,
Capsicum annuum
,
Solanum tuberosum
ABOUT THIS RECORD
ID:
MNEST045549
species:
Solanum tuberosum
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Solanum tuberosum
Solanum
Solaneae
Solanoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGAAGAGAGTGAGCAC
miRNA*
GCTCACTTCTCATTCTG
mismatches:
0
bulges:
2
View larger
pre-miRNA
CAGAAGAGAGTGAGCAC
ACGCAGTCGAATTGTATAAACATTTATACAATTGTCATTTGCGTGT
GCTCACTTCTCATTCTG
dot-bracket secondary structure
(((((((((((((((((
((((((..(((((((((((....)))))))))..))..))))))))
)))))).)))).)))))
SIMILARITIES
miRBase
ctr-MIR156
:
0.000004
PMRD
stu-miR156a
:
4e-40
microPC
miR156
:
4e-40
UniProt
no hits
RFAM
mir-156: 0.00007
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record