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Species belonging to selected taxon:

Sorghum propinquum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST008459
species: Sorghum bicolor
miRNA family: MIRf1365
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGTTGGTGTTGAGCACGACGG

miRNA*
 GTCGTGCCCGTCGCCGTCGCC

mismatches: 5
bulges: 0
View larger
pre-miRNA
 TGCTCCTTCTTGCCGTCGCCGTTGGCCCACACGTTGGTGTTGAGCACGACGGGGTCGCCGCTGGAGTTGCCCATGAACTCCATGTCGATCTCGTCGTGCC
CGTCGCCGTCGCCGGAGGTGAGGTAGAAGGAGGTGACGGTG

dot-bracket secondary structure
..((((((((.(((.(((((.(((((........(((((.((.((((((((((((((.((.(((((((.......))))))))).)))))))))))))).
)).)))))..))))).)))))))))))))))).........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|Q76BW5|XTH8_ORYSJ: 6e-18

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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