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Species belonging to selected taxon:
Sorghum propinquum
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST008497
species:
Sorghum bicolor
miRNA family:
MIRf541
source:
miRNEST
Taxonomy by NCBI:
Sorghum bicolor
Sorghum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGGTCCACATGTCAGTGACCA
miRNA*
GTCACCGACAGGTAGGCCCCG
mismatches:
3
bulges:
0
View larger
pre-miRNA
CGTTATTGCACACCATGGCATG
GTCACCGACAGGTAGGCCCCG
GTGTTCAT
GGGTCCACATGTCAGTGACCA
AGTCATGGGGAGTTTGCAT
dot-bracket secondary structure
......((((..(((((((.((
(((((.((((.((.(((((..
........
))))).)).)))).)))))))
.)))))))......)))).
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf10162-akr
:
0.00002
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record