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Species belonging to selected taxon:

Sorghum propinquum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST008499
species: Sorghum bicolor
miRNA family: miR156a
source: miRNEST

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCTCCCTTCTCTCTCTGTCTA

miRNA*
GGCAAGGAAGGAGGCCGAAAAT

mismatches: 5
bulges: 1

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pre-miRNA
TTGTGGTCCGTGGGCAAGGAAGGAGGCCGAAAATTGCATCAATGCCCCTCCCTTCTCTCTCTGTCTATACCCCCTC

dot-bracket secondary structure
....(((..(((((((.(((.(((((..((.....(((....)))...)).))))).))).)))))))))).....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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