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Species belonging to selected taxon:

Brugia malayi, Onchocerca volvulus



ABOUT THIS RECORD

ID: MNEST038103
species: Brugia malayi
source: miRBase, original name: bma-mir-50 (MI0013330)

Taxonomy by NCBI:
Brugia malayi Brugia Onchocercidae Filarioidea Spirurida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGATATGTCTGATATTCTTGGGTT

miRNA*
CCAGCATCTCAGACGTATCGGC

mismatches: 2
bulges: 2

View larger
pre-miRNA
GCACTTCCTGCATATGCAGTGTTGATATGTCTGATATTCTTGGGTTGTGCAAAGTCAACCAGCATCTCAGACGTATCGGCCACTGTGTATT

dot-bracket secondary structure
(((.....))).((((((((((((((((((((((.((.((..(((((........))))))).)).))))))))))))).)))))))))..


SIMILARITIES
miRBase cbr-mir-50: 0.000001

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-50: 1e-37

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Poole CB, Davis PJ, Jin J, McReynolds LA, Mol Biochem Parasitol. 169:87-94(2010)., "Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi"




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