miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Schistosoma mansoni
,
Schistosoma japonicum
ABOUT THIS RECORD
ID:
MNEST044087
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-3039
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAACATTGGGATGCAGGTACTTT
miRNA*
TGTATCTGCATCCCAATGTGGAT
mismatches:
2
bulges:
0
View larger
pre-miRNA
CTCATCGGCTGGA
TGTATCTGCATCCCAATGTGGAT
CCCACTGTGAACAT
CAACATTGGGATGCAGGTACTTT
CAGTCGACGA
dot-bracket secondary structure
.((.(((((((((
.((((((((((((((((((.(((
............))
).)))))))))))))))))).))
))))))).))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
Hammerhead_1: 0.00007
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record