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Species belonging to selected taxon:

Tamarix hispida



ABOUT THIS RECORD

ID: MNEST002685
species: Tamarix hispida
miRNA family: MIR169
source: miRNEST

Taxonomy by NCBI:
Tamarix hispida Tamarix Tamaricaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAGCCAAGGATGACTTGCCTA

miRNA*
GGCAGTCTCCTTGGCTATC

mismatches: 0
bulges: 2

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pre-miRNA
GTTTGAAGAGAAAACGCCATACATGAAGATGAAGAGTCAATAAATGTTTAGTAGCCAAGGATGACTTGCCTACTCTTCTTTTCATCGTGGTAGTGAATCA
CCATGTAGGGGTAGGTAGGCAGTCTCCTTGGCTATCTTAATAGGCTCTTCTTTCTCATGCTCGGCTTTTACCTCTTTGTTTTTG


dot-bracket secondary structure
....((((((.(((.(((...(((((.((.((((((((......((((.((((((((((((.((((.(((((((..(((((.(((.(((((.....))))
).))).)))))..))))))))))))))))))))).)).)))))))))))).)).)))))...))).)))..)))))).......



SIMILARITIES
miRBase bna-MIR169i: 0.0000000006

PMRD bna-miR169i: 0.0000000006

microPC miR169: 1e-41
UniProt no hits

RFAM MIR169_5: 0.0000002
most similar mature miRNAs

Identical with: miR169 from microPC (MNEST045589)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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